WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K04G7.3a.1 Sequence Name  K04G7.3a.1
Length (nt)  4110   Chromosome Location  III: 7145842-7153797
Chromosome . Primary Identifier  III Chromosome Location . Start  7145842
Chromosome Location . End  7153797 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K04G7.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003858 ogt-1 K04G7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04G7.3a K04G7.3a 3456   III: 7146469-7146643

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K04G7.3a.1 7145842 7153797 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94517   802   III: 7145842-7146643 Caenorhabditis elegans
Exon94519   124   III: 7146693-7146816 Caenorhabditis elegans
Exon94521   118   III: 7147452-7147569 Caenorhabditis elegans
Exon94523   294   III: 7147615-7147908 Caenorhabditis elegans
Exon94525   831   III: 7147965-7148795 Caenorhabditis elegans
Exon94527   639   III: 7148864-7149502 Caenorhabditis elegans
Exon94529   145   III: 7149748-7149892 Caenorhabditis elegans
Exon94531   287   III: 7149945-7150231 Caenorhabditis elegans
Exon94534   313   III: 7150282-7150594 Caenorhabditis elegans
Exon94535   154   III: 7150641-7150794 Caenorhabditis elegans
Exon94536   172   III: 7150846-7151017 Caenorhabditis elegans
Exon94537   168   III: 7153374-7153541 Caenorhabditis elegans
Exon94538   63   III: 7153735-7153797 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K04G7.3a.1 7145842 7153797 -1

1 Sequence

Length
4110

1 Sequence Ontology Term

Identifier Name Description
transcript