WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R151.2d.2 Sequence Name  R151.2d.2
Length (nt)  1888   Chromosome Location  III: 7210073-7215226
Chromosome . Primary Identifier  III Chromosome Location . Start  7210073
Chromosome Location . End  7215226 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R151.2d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020107 prps-1 R151.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R151.2d R151.2d 1341   III: 7210108-7210201

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R151.2d.2 7210073 7215226 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94719   129   III: 7210073-7210201 Caenorhabditis elegans
Exon94721   144   III: 7211436-7211579 Caenorhabditis elegans
Exon94725   158   III: 7212735-7212892 Caenorhabditis elegans
Exon94732   515   III: 7213299-7213813 Caenorhabditis elegans
Exon94737   174   III: 7214121-7214294 Caenorhabditis elegans
Exon94742   160   III: 7214345-7214504 Caenorhabditis elegans
Exon94746   608   III: 7214619-7215226 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R151.2d.2 7210073 7215226 1

1 Sequence

Length
1888

1 Sequence Ontology Term

Identifier Name Description
transcript