WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20H4.3b.1 Sequence Name  T20H4.3b.1
Length (nt)  1797   Chromosome Location  III: 7239038-7241262
Chromosome . Primary Identifier  III Chromosome Location . Start  7239038
Chromosome Location . End  7241262 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20H4.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004189 pars-1 T20H4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20H4.3b T20H4.3b 1365   III: 7239038-7239124

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20H4.3b.1 7239038 7241262 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94825   87   III: 7239038-7239124 Caenorhabditis elegans
Exon94827   591   III: 7239235-7239825 Caenorhabditis elegans
Exon94829   572   III: 7239944-7240515 Caenorhabditis elegans
Exon94830   97   III: 7240562-7240658 Caenorhabditis elegans
Exon94832   450   III: 7240813-7241262 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20H4.3b.1 7239038 7241262 1

1 Sequence

Length
1797

1 Sequence Ontology Term

Identifier Name Description
transcript