WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56C9.6b.1 Sequence Name  F56C9.6b.1
Length (nt)  1233   Chromosome Location  III: 7308997-7310773
Chromosome . Primary Identifier  III Chromosome Location . Start  7308997
Chromosome Location . End  7310773 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56C9.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018950 F56C9.6 F56C9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56C9.6b F56C9.6b 1029   III: 7309144-7309186

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56C9.6b.1 7308997 7310773 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94957   190   III: 7308997-7309186 Caenorhabditis elegans
Exon94960   94   III: 7309234-7309327 Caenorhabditis elegans
Exon94963   163   III: 7309398-7309560 Caenorhabditis elegans
Exon94966   198   III: 7309603-7309800 Caenorhabditis elegans
Exon94969   93   III: 7309847-7309939 Caenorhabditis elegans
Exon94972   128   III: 7309984-7310111 Caenorhabditis elegans
Exon94976   115   III: 7310163-7310277 Caenorhabditis elegans
Exon94978   65   III: 7310358-7310422 Caenorhabditis elegans
Exon94981   67   III: 7310472-7310538 Caenorhabditis elegans
Exon94984   48   III: 7310612-7310659 Caenorhabditis elegans
Exon94987   72   III: 7310702-7310773 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56C9.6b.1 7308997 7310773 -1

1 Sequence

Length
1233

1 Sequence Ontology Term

Identifier Name Description
transcript