WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56C9.6c.1 Sequence Name  F56C9.6c.1
Length (nt)  1059   Chromosome Location  III: 7309144-7310773
Chromosome . Primary Identifier  III Chromosome Location . Start  7309144
Chromosome Location . End  7310773 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56C9.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018950 F56C9.6 F56C9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56C9.6c F56C9.6c 1002   III: 7309144-7309186

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56C9.6c.1 7309144 7310773 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94958   43   III: 7309144-7309186 Caenorhabditis elegans
Exon94961   94   III: 7309234-7309327 Caenorhabditis elegans
Exon94964   163   III: 7309398-7309560 Caenorhabditis elegans
Exon94967   198   III: 7309603-7309800 Caenorhabditis elegans
Exon94970   93   III: 7309847-7309939 Caenorhabditis elegans
Exon94973   128   III: 7309984-7310111 Caenorhabditis elegans
Exon94975   88   III: 7310163-7310250 Caenorhabditis elegans
Exon94979   65   III: 7310358-7310422 Caenorhabditis elegans
Exon94982   67   III: 7310472-7310538 Caenorhabditis elegans
Exon94985   48   III: 7310612-7310659 Caenorhabditis elegans
Exon94988   72   III: 7310702-7310773 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56C9.6c.1 7309144 7310773 -1

1 Sequence

Length
1059

1 Sequence Ontology Term

Identifier Name Description
transcript