WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56C9.10c.1 Sequence Name  F56C9.10c.1
Length (nt)  3623   Chromosome Location  III: 7329713-7335129
Chromosome . Primary Identifier  III Chromosome Location . Start  7329713
Chromosome Location . End  7335129 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56C9.10c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018953 F56C9.10 F56C9.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56C9.10c F56C9.10c 3099   III: 7330225-7330551

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56C9.10c.1 7329713 7335129 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95055   839   III: 7329713-7330551 Caenorhabditis elegans
Exon95060   131   III: 7330669-7330799 Caenorhabditis elegans
Exon95064   1336   III: 7330854-7332189 Caenorhabditis elegans
Exon95068   96   III: 7332236-7332331 Caenorhabditis elegans
Exon95072   423   III: 7332413-7332835 Caenorhabditis elegans
Exon95075   483   III: 7332940-7333422 Caenorhabditis elegans
Exon95080   183   III: 7333608-7333790 Caenorhabditis elegans
Exon95082   132   III: 7334998-7335129 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56C9.10c.1 7329713 7335129 -1

1 Sequence

Length
3623

1 Sequence Ontology Term

Identifier Name Description
transcript