WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08F8.3a.2 Sequence Name  F08F8.3a.2
Length (nt)  2234   Chromosome Location  III: 7338994-7343667
Chromosome . Primary Identifier  III Chromosome Location . Start  7338994
Chromosome Location . End  7343667 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F8.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002182 kap-1 F08F8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08F8.3a F08F8.3a 2133   III: 7339001-7339070

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08F8.3a.2 7338994 7343667 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95095   77   III: 7338994-7339070 Caenorhabditis elegans
Exon95099   73   III: 7339135-7339207 Caenorhabditis elegans
Exon95102   238   III: 7339654-7339891 Caenorhabditis elegans
Exon95105   112   III: 7340247-7340358 Caenorhabditis elegans
Exon95108   137   III: 7340451-7340587 Caenorhabditis elegans
Exon95111   139   III: 7340650-7340788 Caenorhabditis elegans
Exon95114   88   III: 7340835-7340922 Caenorhabditis elegans
Exon95117   355   III: 7341053-7341407 Caenorhabditis elegans
Exon95120   219   III: 7341758-7341976 Caenorhabditis elegans
Exon95123   125   III: 7342063-7342187 Caenorhabditis elegans
Exon95126   203   III: 7342234-7342436 Caenorhabditis elegans
Exon95129   68   III: 7342823-7342890 Caenorhabditis elegans
Exon95132   201   III: 7342938-7343138 Caenorhabditis elegans
Exon95136   199   III: 7343469-7343667 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08F8.3a.2 7338994 7343667 1

1 Sequence

Length
2234

1 Sequence Ontology Term

Identifier Name Description
transcript