WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08F8.3b.1 Sequence Name  F08F8.3b.1
Length (nt)  2142   Chromosome Location  III: 7339001-7343573
Chromosome . Primary Identifier  III Chromosome Location . Start  7339001
Chromosome Location . End  7343573 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F8.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002182 kap-1 F08F8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08F8.3b F08F8.3b 2142   III: 7339001-7339070

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08F8.3b.1 7339001 7343573 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95097   70   III: 7339001-7339070 Caenorhabditis elegans
Exon95100   73   III: 7339135-7339207 Caenorhabditis elegans
Exon95103   238   III: 7339654-7339891 Caenorhabditis elegans
Exon95106   112   III: 7340247-7340358 Caenorhabditis elegans
Exon95109   146   III: 7340451-7340596 Caenorhabditis elegans
Exon95112   139   III: 7340650-7340788 Caenorhabditis elegans
Exon95115   88   III: 7340835-7340922 Caenorhabditis elegans
Exon95118   355   III: 7341053-7341407 Caenorhabditis elegans
Exon95121   219   III: 7341758-7341976 Caenorhabditis elegans
Exon95124   125   III: 7342063-7342187 Caenorhabditis elegans
Exon95127   203   III: 7342234-7342436 Caenorhabditis elegans
Exon95130   68   III: 7342823-7342890 Caenorhabditis elegans
Exon95133   201   III: 7342938-7343138 Caenorhabditis elegans
Exon95134   105   III: 7343469-7343573 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08F8.3b.1 7339001 7343573 1

1 Sequence

Length
2142

1 Sequence Ontology Term

Identifier Name Description
transcript