WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08F8.10a.1 Sequence Name  F08F8.10a.1
Length (nt)  1669   Chromosome Location  III: 7354159-7357387
Chromosome . Primary Identifier  III Chromosome Location . Start  7354159
Chromosome Location . End  7357387 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F8.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017275 F08F8.10 F08F8.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08F8.10a F08F8.10a 1572   III: 7354256-7354335

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08F8.10a.1 7354159 7357387 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95144   177   III: 7354159-7354335 Caenorhabditis elegans
Exon95147   60   III: 7354383-7354442 Caenorhabditis elegans
Exon95150   227   III: 7354908-7355134 Caenorhabditis elegans
Exon95152   618   III: 7356042-7356659 Caenorhabditis elegans
Exon95155   332   III: 7356706-7357037 Caenorhabditis elegans
Exon95158   118   III: 7357086-7357203 Caenorhabditis elegans
Exon95161   137   III: 7357251-7357387 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08F8.10a.1 7354159 7357387 -1

1 Sequence

Length
1669

1 Sequence Ontology Term

Identifier Name Description
transcript