WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T20B12.2 Sequence Name  T20B12.2
Length (nt)  1023   Chromosome Location  III: 7384039-7384246
Chromosome . Primary Identifier  III Chromosome Location . Start  7384039
Chromosome Location . End  7384246
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20B12.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01408 TBP-1 36.6 340 Caenorhabditis elegans
 

Other

50 RNAi

WormBase ID
WBRNAi00113253
WBRNAi00067444
WBRNAi00067526
WBRNAi00067545
WBRNAi00067669
WBRNAi00067755
WBRNAi00053578
WBRNAi00113418
WBRNAi00071310
WBRNAi00113023
WBRNAi00111691
WBRNAi00026324
WBRNAi00000206
WBRNAi00002461
WBRNAi00002745
WBRNAi00053577
WBRNAi00009188
WBRNAi00027581
WBRNAi00103755
WBRNAi00103768
WBRNAi00103751
WBRNAi00075441
WBRNAi00105324
WBRNAi00105322
WBRNAi00105323
WBRNAi00105326
WBRNAi00105325
WBRNAi00105328
WBRNAi00105327
WBRNAi00105330

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T20B12.2 7384039 7384246 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006542 tbp-1 T20B12.2 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T20B12.2 7384039 7384246 1
CDS:T20B12.2 7384871 7385433 1
CDS:T20B12.2 7385486 7385650 1
CDS:T20B12.2 7385696 7385782 1

1 Sequence

Length
1023

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T20B12.2.1 T20B12.2.1 1371   III: 7384033-7386124