WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T20B12.1 Sequence Name  T20B12.1
Length (nt)  2316   Chromosome Location  III: 7386229-7386291
Chromosome . Primary Identifier  III Chromosome Location . Start  7386229
Chromosome Location . End  7386291
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20B12.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41454 TRD-1 88.0 771 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00094348
WBRNAi00067347
WBRNAi00067577
WBRNAi00067616
WBRNAi00067653
WBRNAi00009187
WBRNAi00026323
WBRNAi00000341
WBRNAi00112244
WBRNAi00085393
WBRNAi00094103
WBRNAi00071803
WBRNAi00053575
WBRNAi00053576
WBRNAi00112242
WBRNAi00071309
WBRNAi00111690
WBRNAi00002462
WBRNAi00002706
WBRNAi00112243
WBRNAi00094464

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T20B12.1 7386229 7386291 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020600 trd-1 T20B12.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T20B12.1 7386229 7386291 1
CDS:T20B12.1 7387116 7387203 1
CDS:T20B12.1 7387958 7388205 1
CDS:T20B12.1 7388664 7389300 1
CDS:T20B12.1 7389511 7389917 1
CDS:T20B12.1 7389963 7390454 1
CDS:T20B12.1 7390515 7390748 1
CDS:T20B12.1 7390796 7390942 1

1 Sequence

Length
2316

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T20B12.1.1 T20B12.1.1 2509   III: 7386229-7391135