WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20B12.9.1 Sequence Name  T20B12.9.1
Length (nt)  2214   Chromosome Location  III: 7391090-7395454
Chromosome . Primary Identifier  III Chromosome Location . Start  7391090
Chromosome Location . End  7395454 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20B12.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020605 lgc-50 T20B12.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20B12.9 T20B12.9 1476   III: 7391758-7391800

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20B12.9.1 7391090 7395454 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95244   711   III: 7391090-7391800 Caenorhabditis elegans
Exon95245   56   III: 7391936-7391991 Caenorhabditis elegans
Exon95246   114   III: 7392041-7392154 Caenorhabditis elegans
Exon95247   286   III: 7392241-7392526 Caenorhabditis elegans
Exon95249   293   III: 7392830-7393122 Caenorhabditis elegans
Exon95250   87   III: 7393809-7393895 Caenorhabditis elegans
Exon95251   111   III: 7393981-7394091 Caenorhabditis elegans
Exon95252   37   III: 7394382-7394418 Caenorhabditis elegans
Exon95253   134   III: 7394508-7394641 Caenorhabditis elegans
Exon95254   229   III: 7394692-7394920 Caenorhabditis elegans
Exon95255   156   III: 7395299-7395454 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20B12.9.1 7391090 7395454 -1

1 Sequence

Length
2214

1 Sequence Ontology Term

Identifier Name Description
transcript