WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07D8.1.1 Sequence Name  K07D8.1.1
Length (nt)  6752   Chromosome Location  III: 7479680-7489105
Chromosome . Primary Identifier  III Chromosome Location . Start  7479680
Chromosome Location . End  7489105 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07D8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003497 mup-4 K07D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07D8.1 K07D8.1 6315   III: 7480074-7480175

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07D8.1.1 7479680 7489105 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95333   496   III: 7479680-7480175 Caenorhabditis elegans
Exon95334   264   III: 7480223-7480486 Caenorhabditis elegans
Exon95335   541   III: 7480538-7481078 Caenorhabditis elegans
Exon95336   191   III: 7481129-7481319 Caenorhabditis elegans
Exon95337   133   III: 7481488-7481620 Caenorhabditis elegans
Exon95338   263   III: 7481666-7481928 Caenorhabditis elegans
Exon95339   732   III: 7481978-7482709 Caenorhabditis elegans
Exon95340   299   III: 7482759-7483057 Caenorhabditis elegans
Exon95341   285   III: 7483374-7483658 Caenorhabditis elegans
Exon95342   312   III: 7483724-7484035 Caenorhabditis elegans
Exon95343   291   III: 7484084-7484374 Caenorhabditis elegans
Exon95344   87   III: 7484422-7484508 Caenorhabditis elegans
Exon95345   210   III: 7484556-7484765 Caenorhabditis elegans
Exon95346   150   III: 7484813-7484962 Caenorhabditis elegans
Exon95347   306   III: 7485067-7485372 Caenorhabditis elegans
Exon95348   487   III: 7485421-7485907 Caenorhabditis elegans
Exon95349   533   III: 7486003-7486535 Caenorhabditis elegans
Exon95350   997   III: 7486915-7487911 Caenorhabditis elegans
Exon95351   56   III: 7488141-7488196 Caenorhabditis elegans
Exon95352   119   III: 7488987-7489105 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07D8.1.1 7479680 7489105 -1

1 Sequence

Length
6752

1 Sequence Ontology Term

Identifier Name Description
transcript