WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07H6.6.1 Sequence Name  C07H6.6.1
Length (nt)  2809   Chromosome Location  III: 7515222-7518524
Chromosome . Primary Identifier  III Chromosome Location . Start  7515222
Chromosome Location . End  7518524 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07H6.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000537 clk-2 C07H6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07H6.6 C07H6.6 2634   III: 7515397-7515576

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07H6.6.1 7515222 7518524 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95362   355   III: 7515222-7515576 Caenorhabditis elegans
Exon95363   106   III: 7515623-7515728 Caenorhabditis elegans
Exon95364   95   III: 7515778-7515872 Caenorhabditis elegans
Exon95365   1165   III: 7515979-7517143 Caenorhabditis elegans
Exon95366   104   III: 7517188-7517291 Caenorhabditis elegans
Exon95367   153   III: 7517341-7517493 Caenorhabditis elegans
Exon95368   333   III: 7517545-7517877 Caenorhabditis elegans
Exon95369   134   III: 7517925-7518058 Caenorhabditis elegans
Exon95370   208   III: 7518110-7518317 Caenorhabditis elegans
Exon95371   156   III: 7518369-7518524 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07H6.6.1 7515222 7518524 -1

1 Sequence

Length
2809

1 Sequence Ontology Term

Identifier Name Description
transcript