WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07H6.1.1 Sequence Name  C07H6.1.1
Length (nt)  2391   Chromosome Location  III: 7521463-7524870
Chromosome . Primary Identifier  III Chromosome Location . Start  7521463
Chromosome Location . End  7524870 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07H6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002986 lig-4 C07H6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07H6.1 C07H6.1 2226   III: 7521470-7521590

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07H6.1.1 7521463 7524870 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95399   128   III: 7521463-7521590 Caenorhabditis elegans
Exon95400   300   III: 7521643-7521942 Caenorhabditis elegans
Exon95401   314   III: 7521990-7522303 Caenorhabditis elegans
Exon95402   123   III: 7522353-7522475 Caenorhabditis elegans
Exon95403   214   III: 7522738-7522951 Caenorhabditis elegans
Exon95404   151   III: 7522997-7523147 Caenorhabditis elegans
Exon95405   96   III: 7523198-7523293 Caenorhabditis elegans
Exon95406   452   III: 7523343-7523794 Caenorhabditis elegans
Exon95407   111   III: 7523845-7523955 Caenorhabditis elegans
Exon95408   147   III: 7524003-7524149 Caenorhabditis elegans
Exon95410   355   III: 7524516-7524870 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07H6.1.1 7521463 7524870 1

1 Sequence

Length
2391

1 Sequence Ontology Term

Identifier Name Description
transcript