WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13A5.4.1 Sequence Name  R13A5.4.1
Length (nt)  1316   Chromosome Location  III: 7562172-7564558
Chromosome . Primary Identifier  III Chromosome Location . Start  7562172
Chromosome Location . End  7564558 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13A5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020048 lgc-12 R13A5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13A5.4 R13A5.4 1287   III: 7562172-7562375

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13A5.4.1 7562172 7564558 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95427   204   III: 7562172-7562375 Caenorhabditis elegans
Exon95428   155   III: 7562423-7562577 Caenorhabditis elegans
Exon95429   79   III: 7562682-7562760 Caenorhabditis elegans
Exon95430   141   III: 7562811-7562951 Caenorhabditis elegans
Exon95431   108   III: 7562998-7563105 Caenorhabditis elegans
Exon95432   123   III: 7563162-7563284 Caenorhabditis elegans
Exon95433   97   III: 7564008-7564104 Caenorhabditis elegans
Exon95434   409   III: 7564150-7564558 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13A5.4.1 7562172 7564558 1

1 Sequence

Length
1316

1 Sequence Ontology Term

Identifier Name Description
transcript