WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13A5.8.1 Sequence Name  R13A5.8.1
Length (nt)  626   Chromosome Location  III: 7572105-7572831
Chromosome . Primary Identifier  III Chromosome Location . Start  7572105
Chromosome Location . End  7572831 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13A5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004420 rpl-9 R13A5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13A5.8 R13A5.8 570   III: 7572145-7572248

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13A5.8.1 7572105 7572831 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95454   144   III: 7572105-7572248 Caenorhabditis elegans
Exon95455   133   III: 7572299-7572431 Caenorhabditis elegans
Exon95456   349   III: 7572483-7572831 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13A5.8.1 7572105 7572831 -1

1 Sequence

Length
626

1 Sequence Ontology Term

Identifier Name Description
transcript