WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13A5.12.1 Sequence Name  R13A5.12.1
Length (nt)  1723   Chromosome Location  III: 7573350-7575263
Chromosome . Primary Identifier  III Chromosome Location . Start  7573350
Chromosome Location . End  7575263 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13A5.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003063 lpd-7 R13A5.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13A5.12 R13A5.12 1596   III: 7573354-7573476

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13A5.12.1 7573350 7575263 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95458   127   III: 7573350-7573476 Caenorhabditis elegans
Exon95459   135   III: 7573524-7573658 Caenorhabditis elegans
Exon95460   1036   III: 7573704-7574739 Caenorhabditis elegans
Exon95462   425   III: 7574839-7575263 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13A5.12.1 7573350 7575263 1

1 Sequence

Length
1723

1 Sequence Ontology Term

Identifier Name Description
transcript