WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13A5.6.1 Sequence Name  R13A5.6.1
Length (nt)  474   Chromosome Location  III: 7564500-7565347
Chromosome . Primary Identifier  III Chromosome Location . Start  7564500
Chromosome Location . End  7565347 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13A5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020049 ttr-8 R13A5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13A5.6 R13A5.6 417   III: 7564555-7564826

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13A5.6.1 7564500 7565347 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95473   327   III: 7564500-7564826 Caenorhabditis elegans
Exon95474   147   III: 7565201-7565347 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13A5.6.1 7564500 7565347 -1

1 Sequence

Length
474

1 Sequence Ontology Term

Identifier Name Description
transcript