WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13A5.9.1 Sequence Name  R13A5.9.1
Length (nt)  2075   Chromosome Location  III: 7575284-7579411
Chromosome . Primary Identifier  III Chromosome Location . Start  7575284
Chromosome Location . End  7579411 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13A5.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020051 mfsd-6 R13A5.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13A5.9 R13A5.9 1893   III: 7575464-7575609

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13A5.9.1 7575284 7579411 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95463   326   III: 7575284-7575609 Caenorhabditis elegans
Exon95464   303   III: 7576010-7576312 Caenorhabditis elegans
Exon95465   112   III: 7576833-7576944 Caenorhabditis elegans
Exon95466   246   III: 7577164-7577409 Caenorhabditis elegans
Exon95467   507   III: 7577525-7578031 Caenorhabditis elegans
Exon95468   92   III: 7578194-7578285 Caenorhabditis elegans
Exon95469   135   III: 7578335-7578469 Caenorhabditis elegans
Exon95470   107   III: 7578516-7578622 Caenorhabditis elegans
Exon95471   80   III: 7578780-7578859 Caenorhabditis elegans
Exon95472   167   III: 7579245-7579411 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13A5.9.1 7575284 7579411 -1

1 Sequence

Length
2075

1 Sequence Ontology Term

Identifier Name Description
transcript