WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK783.1g.1 Sequence Name  ZK783.1g.1
Length (nt)  8339   Chromosome Location  III: 7625386-7640924
Chromosome . Primary Identifier  III Chromosome Location . Start  7625386
Chromosome Location . End  7640924 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK783.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022816 fbn-1 ZK783.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK783.1g ZK783.1g 7971   III: 7625386-7625461

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK783.1g.1 7625386 7640924 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95592   76   III: 7625386-7625461 Caenorhabditis elegans
Exon95602   103   III: 7626212-7626314 Caenorhabditis elegans
Exon95611   107   III: 7626796-7626902 Caenorhabditis elegans
Exon95620   338   III: 7626953-7627290 Caenorhabditis elegans
Exon95629   289   III: 7627586-7627874 Caenorhabditis elegans
Exon95638   234   III: 7628089-7628322 Caenorhabditis elegans
Exon95647   615   III: 7628372-7628986 Caenorhabditis elegans
Exon95657   1706   III: 7629299-7631004 Caenorhabditis elegans
Exon95665   94   III: 7631054-7631147 Caenorhabditis elegans
Exon95674   607   III: 7631223-7631829 Caenorhabditis elegans
Exon95683   122   III: 7631890-7632011 Caenorhabditis elegans
Exon95692   930   III: 7632209-7633138 Caenorhabditis elegans
Exon95701   414   III: 7633191-7633604 Caenorhabditis elegans
Exon95710   219   III: 7633654-7633872 Caenorhabditis elegans
Exon95725   66   III: 7637191-7637256 Caenorhabditis elegans
Exon95738   428   III: 7637800-7638227 Caenorhabditis elegans
Exon95746   286   III: 7638276-7638561 Caenorhabditis elegans
Exon95754   297   III: 7638614-7638910 Caenorhabditis elegans
Exon95762   191   III: 7638979-7639169 Caenorhabditis elegans
Exon95770   57   III: 7639220-7639276 Caenorhabditis elegans
Exon95778   537   III: 7639328-7639864 Caenorhabditis elegans
Exon95785   623   III: 7640302-7640924 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK783.1g.1 7625386 7640924 1

1 Sequence

Length
8339

1 Sequence Ontology Term

Identifier Name Description
transcript