WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK783.1a.1 Sequence Name  ZK783.1a.1
Length (nt)  8858   Chromosome Location  III: 7625386-7641074
Chromosome . Primary Identifier  III Chromosome Location . Start  7625386
Chromosome Location . End  7641074 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK783.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022816 fbn-1 ZK783.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK783.1a ZK783.1a 8340   III: 7625386-7625461

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK783.1a.1 7625386 7641074 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95627   76   III: 7625386-7625461 Caenorhabditis elegans
Exon95635   103   III: 7626212-7626314 Caenorhabditis elegans
Exon95644   107   III: 7626796-7626902 Caenorhabditis elegans
Exon95653   338   III: 7626953-7627290 Caenorhabditis elegans
Exon95662   289   III: 7627586-7627874 Caenorhabditis elegans
Exon95671   234   III: 7628089-7628322 Caenorhabditis elegans
Exon95680   615   III: 7628372-7628986 Caenorhabditis elegans
Exon95690   1706   III: 7629299-7631004 Caenorhabditis elegans
Exon95698   94   III: 7631054-7631147 Caenorhabditis elegans
Exon95707   607   III: 7631223-7631829 Caenorhabditis elegans
Exon95716   122   III: 7631890-7632011 Caenorhabditis elegans
Exon95725   930   III: 7632209-7633138 Caenorhabditis elegans
Exon95734   414   III: 7633191-7633604 Caenorhabditis elegans
Exon95743   219   III: 7633654-7633872 Caenorhabditis elegans
Exon95752   69   III: 7634818-7634886 Caenorhabditis elegans
Exon95755   159   III: 7636315-7636473 Caenorhabditis elegans
Exon95760   66   III: 7637191-7637256 Caenorhabditis elegans
Exon95765   141   III: 7637356-7637496 Caenorhabditis elegans
Exon95771   428   III: 7637800-7638227 Caenorhabditis elegans
Exon95779   286   III: 7638276-7638561 Caenorhabditis elegans
Exon95787   297   III: 7638614-7638910 Caenorhabditis elegans
Exon95795   191   III: 7638979-7639169 Caenorhabditis elegans
Exon95803   57   III: 7639220-7639276 Caenorhabditis elegans
Exon95811   537   III: 7639328-7639864 Caenorhabditis elegans
Exon95825   773   III: 7640302-7641074 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK783.1a.1 7625386 7641074 1

1 Sequence

Length
8858

1 Sequence Ontology Term

Identifier Name Description
transcript