WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK783.1h.1 Sequence Name  ZK783.1h.1
Length (nt)  8046   Chromosome Location  III: 7625386-7640556
Chromosome . Primary Identifier  III Chromosome Location . Start  7625386
Chromosome Location . End  7640556 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK783.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022816 fbn-1 ZK783.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK783.1h ZK783.1h 8046   III: 7625386-7625461

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK783.1h.1 7625386 7640556 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95628   76   III: 7625386-7625461 Caenorhabditis elegans
Exon95641   103   III: 7626212-7626314 Caenorhabditis elegans
Exon95650   107   III: 7626796-7626902 Caenorhabditis elegans
Exon95659   338   III: 7626953-7627290 Caenorhabditis elegans
Exon95668   289   III: 7627586-7627874 Caenorhabditis elegans
Exon95677   234   III: 7628089-7628322 Caenorhabditis elegans
Exon95686   615   III: 7628372-7628986 Caenorhabditis elegans
Exon95696   1706   III: 7629299-7631004 Caenorhabditis elegans
Exon95704   94   III: 7631054-7631147 Caenorhabditis elegans
Exon95713   607   III: 7631223-7631829 Caenorhabditis elegans
Exon95722   122   III: 7631890-7632011 Caenorhabditis elegans
Exon95731   930   III: 7632209-7633138 Caenorhabditis elegans
Exon95740   414   III: 7633191-7633604 Caenorhabditis elegans
Exon95749   219   III: 7633654-7633872 Caenorhabditis elegans
Exon95769   141   III: 7637356-7637496 Caenorhabditis elegans
Exon95777   428   III: 7637800-7638227 Caenorhabditis elegans
Exon95785   286   III: 7638276-7638561 Caenorhabditis elegans
Exon95793   297   III: 7638614-7638910 Caenorhabditis elegans
Exon95801   191   III: 7638979-7639169 Caenorhabditis elegans
Exon95809   57   III: 7639220-7639276 Caenorhabditis elegans
Exon95817   537   III: 7639328-7639864 Caenorhabditis elegans
Exon95821   255   III: 7640302-7640556 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK783.1h.1 7625386 7640556 1

1 Sequence

Length
8046

1 Sequence Ontology Term

Identifier Name Description
transcript