WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C03B8.4.1 Sequence Name  C03B8.4.1
Length (nt)  7053   Chromosome Location  III: 7700338-7709491
Chromosome . Primary Identifier  III Chromosome Location . Start  7700338
Chromosome Location . End  7709491 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C03B8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003002 lin-13 C03B8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03B8.4 C03B8.4 6747   III: 7700625-7700894

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C03B8.4.1 7700338 7709491 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon95880   557   III: 7700338-7700894 Caenorhabditis elegans
Exon95881   135   III: 7700975-7701109 Caenorhabditis elegans
Exon95882   99   III: 7701159-7701257 Caenorhabditis elegans
Exon95883   281   III: 7701305-7701585 Caenorhabditis elegans
Exon95884   166   III: 7701638-7701803 Caenorhabditis elegans
Exon95885   471   III: 7701852-7702322 Caenorhabditis elegans
Exon95886   186   III: 7702368-7702553 Caenorhabditis elegans
Exon95887   279   III: 7702602-7702880 Caenorhabditis elegans
Exon95888   244   III: 7702928-7703171 Caenorhabditis elegans
Exon95889   181   III: 7703221-7703401 Caenorhabditis elegans
Exon95890   841   III: 7703619-7704459 Caenorhabditis elegans
Exon95891   729   III: 7704506-7705234 Caenorhabditis elegans
Exon95892   480   III: 7705337-7705816 Caenorhabditis elegans
Exon95893   79   III: 7705869-7705947 Caenorhabditis elegans
Exon95894   548   III: 7705997-7706544 Caenorhabditis elegans
Exon95895   202   III: 7706592-7706793 Caenorhabditis elegans
Exon95897   257   III: 7707049-7707305 Caenorhabditis elegans
Exon95898   345   III: 7707359-7707703 Caenorhabditis elegans
Exon95899   217   III: 7707751-7707967 Caenorhabditis elegans
Exon95900   474   III: 7708012-7708485 Caenorhabditis elegans
Exon95901   182   III: 7709167-7709348 Caenorhabditis elegans
Exon95902   100   III: 7709392-7709491 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C03B8.4.1 7700338 7709491 -1

1 Sequence

Length
7053

1 Sequence Ontology Term

Identifier Name Description
transcript