WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK112.2e Sequence Name  ZK112.2e
Length (nt)  2751   Chromosome Location  III: 7727784-7727837
Chromosome . Primary Identifier  III Chromosome Location . Start  7727784
Chromosome Location . End  7727837
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK112.2e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50121 NCL-1, isoform e 99.2 916 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00059120
WBRNAi00059121
WBRNAi00021811
WBRNAi00021812
WBRNAi00076868
WBRNAi00005181
WBRNAi00005763
WBRNAi00027760
WBRNAi00069256
WBRNAi00069255
WBRNAi00069258
WBRNAi00069257

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK112.2e 7727784 7727837 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003559 ncl-1 ZK112.2 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK112.2e 7727784 7727837 1
CDS:ZK112.2e 7731389 7731537 1
CDS:ZK112.2e 7731589 7731991 1
CDS:ZK112.2e 7732033 7732410 1
CDS:ZK112.2e 7733031 7733117 1
CDS:ZK112.2e 7733318 7733464 1
CDS:ZK112.2e 7734649 7734816 1
CDS:ZK112.2e 7734884 7735783 1
CDS:ZK112.2e 7735832 7736119 1
CDS:ZK112.2e 7736175 7736351 1

1 Sequence

Length
2751

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK112.2e.1 ZK112.2e.1 2751   III: 7727784-7736351