WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK112.7 Sequence Name  ZK112.7
Length (nt)  10086   Chromosome Location  III: 7741395-7741514
Chromosome . Primary Identifier  III Chromosome Location . Start  7741395
Chromosome Location . End  7741514
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK112.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50490 CDH-3 377.8 3361 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00107682
WBRNAi00059125
WBRNAi00021816
WBRNAi00005441

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK112.7 7741395 7741514 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000395 cdh-3 ZK112.7 Caenorhabditis elegans

22 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK112.7 7741395 7741514 -1
CDS:ZK112.7 7741577 7742212 -1
CDS:ZK112.7 7742503 7743936 -1
CDS:ZK112.7 7744009 7744183 -1
CDS:ZK112.7 7744230 7745182 -1
CDS:ZK112.7 7745243 7745380 -1
CDS:ZK112.7 7745428 7746061 -1
CDS:ZK112.7 7746182 7747061 -1
CDS:ZK112.7 7747110 7748318 -1
CDS:ZK112.7 7748478 7748850 -1
CDS:ZK112.7 7749122 7749650 -1
CDS:ZK112.7 7749706 7749893 -1
CDS:ZK112.7 7749941 7750617 -1
CDS:ZK112.7 7750665 7750972 -1
CDS:ZK112.7 7751029 7751395 -1
CDS:ZK112.7 7751445 7751911 -1
CDS:ZK112.7 7752164 7752300 -1
CDS:ZK112.7 7752442 7752676 -1
CDS:ZK112.7 7753230 7753489 -1
CDS:ZK112.7 7753586 7753729 -1
CDS:ZK112.7 7753776 7753882 -1
CDS:ZK112.7 7754334 7754448 -1

1 Sequence

Length
10086

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK112.7.1 ZK112.7.1 10252   III: 7741229-7754448