WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08C3.3.1 Sequence Name  C08C3.3.1
Length (nt)  1103   Chromosome Location  III: 7776835-7783454
Chromosome . Primary Identifier  III Chromosome Location . Start  7776835
Chromosome Location . End  7783454 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08C3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003102 mab-5 C08C3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08C3.3 C08C3.3 603   III: 7777269-7777391

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08C3.3.1 7776835 7783454 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96106   557   III: 7776835-7777391 Caenorhabditis elegans
Exon96107   149   III: 7778391-7778539 Caenorhabditis elegans
Exon96108   104   III: 7782104-7782207 Caenorhabditis elegans
Exon96109   83   III: 7782893-7782975 Caenorhabditis elegans
Exon96110   210   III: 7783245-7783454 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08C3.3.1 7776835 7783454 -1

1 Sequence

Length
1103

1 Sequence Ontology Term

Identifier Name Description
transcript