WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08C3.1c.1 Sequence Name  C08C3.1c.1
Length (nt)  1567   Chromosome Location  III: 7814374-7817141
Chromosome . Primary Identifier  III Chromosome Location . Start  7814374
Chromosome Location . End  7817141 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08C3.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001174 egl-5 C08C3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08C3.1c C08C3.1c 669   III: 7814471-7814572

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08C3.1c.1 7814374 7817141 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96129   199   III: 7814374-7814572 Caenorhabditis elegans
Exon96133   85   III: 7815055-7815139 Caenorhabditis elegans
Exon96138   138   III: 7815193-7815330 Caenorhabditis elegans
Exon96141   1145   III: 7815997-7817141 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08C3.1c.1 7814374 7817141 1

1 Sequence

Length
1567

1 Sequence Ontology Term

Identifier Name Description
transcript