WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C08C3.1a Sequence Name  C08C3.1a
Length (nt)  660   Chromosome Location  III: 7814471-7814572
Chromosome . Primary Identifier  III Chromosome Location . Start  7814471
Chromosome Location . End  7814572
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08C3.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29076 EGL-5, isoform a 24.7 219 Caenorhabditis elegans
 

Other

25 RNAi

WormBase ID
WBRNAi00089837
WBRNAi00040079
WBRNAi00024506
WBRNAi00027164
WBRNAi00099903
WBRNAi00100351
WBRNAi00010436
WBRNAi00005625
WBRNAi00027794
WBRNAi00100725
WBRNAi00101091
WBRNAi00099499
WBRNAi00099701
WBRNAi00099297
WBRNAi00099977
WBRNAi00100164
WBRNAi00070164
WBRNAi00092847
WBRNAi00091434
WBRNAi00100538
WBRNAi00100912
WBRNAi00101158
WBRNAi00089908
WBRNAi00090068
WBRNAi00090226

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C08C3.1a 7814471 7814572 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001174 egl-5 C08C3.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:C08C3.1a 7814471 7814572 1
CDS:C08C3.1a 7815055 7815142 1
CDS:C08C3.1a 7815193 7815318 1
CDS:C08C3.1a 7815997 7816340 1

1 Sequence

Length
660

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C08C3.1a.1 C08C3.1a.1 1551   III: 7814380-7817140