WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27D11.1.1 Sequence Name  C27D11.1.1
Length (nt)  3588   Chromosome Location  III: 7824377-7828626
Chromosome . Primary Identifier  III Chromosome Location . Start  7824377
Chromosome Location . End  7828626 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27D11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001209 egl-45 C27D11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27D11.1 C27D11.1 3231   III: 7824696-7824967

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27D11.1.1 7824377 7828626 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96144   591   III: 7824377-7824967 Caenorhabditis elegans
Exon96145   716   III: 7825033-7825748 Caenorhabditis elegans
Exon96146   1476   III: 7826048-7827523 Caenorhabditis elegans
Exon96147   114   III: 7827620-7827733 Caenorhabditis elegans
Exon96148   410   III: 7827789-7828198 Caenorhabditis elegans
Exon96149   132   III: 7828294-7828425 Caenorhabditis elegans
Exon96150   149   III: 7828478-7828626 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27D11.1.1 7824377 7828626 -1

1 Sequence

Length
3588

1 Sequence Ontology Term

Identifier Name Description
transcript