WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02C2.4.1 Sequence Name  C02C2.4.1
Length (nt)  1827   Chromosome Location  III: 7862580-7865288
Chromosome . Primary Identifier  III Chromosome Location . Start  7862580
Chromosome Location . End  7865288 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02C2.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015333 slc-17.3 C02C2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02C2.4 C02C2.4 1608   III: 7862642-7862887

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02C2.4.1 7862580 7865288 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96259   308   III: 7862580-7862887 Caenorhabditis elegans
Exon96260   154   III: 7862940-7863093 Caenorhabditis elegans
Exon96261   91   III: 7863142-7863232 Caenorhabditis elegans
Exon96262   133   III: 7863277-7863409 Caenorhabditis elegans
Exon96263   153   III: 7863459-7863611 Caenorhabditis elegans
Exon96264   134   III: 7863785-7863918 Caenorhabditis elegans
Exon96265   178   III: 7864035-7864212 Caenorhabditis elegans
Exon96266   234   III: 7864258-7864491 Caenorhabditis elegans
Exon96267   75   III: 7864537-7864611 Caenorhabditis elegans
Exon96268   144   III: 7864657-7864800 Caenorhabditis elegans
Exon96269   50   III: 7864855-7864904 Caenorhabditis elegans
Exon96270   173   III: 7865116-7865288 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02C2.4.1 7862580 7865288 -1

1 Sequence

Length
1827

1 Sequence Ontology Term

Identifier Name Description
transcript