WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK688.5d.1 Sequence Name  ZK688.5d.1
Length (nt)  5359   Chromosome Location  III: 7885084-7891621
Chromosome . Primary Identifier  III Chromosome Location . Start  7885084
Chromosome Location . End  7891621 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK688.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022800 ZK688.5 ZK688.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK688.5d ZK688.5d 4845   III: 7885537-7885646

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK688.5d.1 7885084 7891621 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96268   563   III: 7885084-7885646 Caenorhabditis elegans
Exon96282   171   III: 7885798-7885968 Caenorhabditis elegans
Exon96290   240   III: 7886030-7886269 Caenorhabditis elegans
Exon96298   693   III: 7886424-7887116 Caenorhabditis elegans
Exon96306   193   III: 7887162-7887354 Caenorhabditis elegans
Exon96314   2369   III: 7887779-7890147 Caenorhabditis elegans
Exon96322   263   III: 7890194-7890456 Caenorhabditis elegans
Exon96329   207   III: 7890557-7890763 Caenorhabditis elegans
Exon96337   312   III: 7890815-7891126 Caenorhabditis elegans
Exon96349   167   III: 7891226-7891392 Caenorhabditis elegans
Exon96357   181   III: 7891441-7891621 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK688.5d.1 7885084 7891621 -1

1 Sequence

Length
5359

1 Sequence Ontology Term

Identifier Name Description
transcript