WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK688.5e.1 Sequence Name  ZK688.5e.1
Length (nt)  5317   Chromosome Location  III: 7885084-7891623
Chromosome . Primary Identifier  III Chromosome Location . Start  7885084
Chromosome Location . End  7891623 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK688.5e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022800 ZK688.5 ZK688.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK688.5e ZK688.5e 4920   III: 7885418-7885602

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK688.5e.1 7885084 7891623 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96270   519   III: 7885084-7885602 Caenorhabditis elegans
Exon96283   171   III: 7885798-7885968 Caenorhabditis elegans
Exon96291   240   III: 7886030-7886269 Caenorhabditis elegans
Exon96299   693   III: 7886424-7887116 Caenorhabditis elegans
Exon96307   193   III: 7887162-7887354 Caenorhabditis elegans
Exon96315   2369   III: 7887779-7890147 Caenorhabditis elegans
Exon96323   263   III: 7890194-7890456 Caenorhabditis elegans
Exon96330   207   III: 7890557-7890763 Caenorhabditis elegans
Exon96338   312   III: 7890815-7891126 Caenorhabditis elegans
Exon96350   167   III: 7891226-7891392 Caenorhabditis elegans
Exon96358   183   III: 7891441-7891623 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK688.5e.1 7885084 7891623 -1

1 Sequence

Length
5317

1 Sequence Ontology Term

Identifier Name Description
transcript