WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29E4.5b.2 Sequence Name  C29E4.5b.2
Length (nt)  2251   Chromosome Location  III: 7917994-7924918
Chromosome . Primary Identifier  III Chromosome Location . Start  7917994
Chromosome Location . End  7924918 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29E4.5b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016203 tag-250 C29E4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29E4.5b C29E4.5b 459   III: 7922053-7922123

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29E4.5b.2 7917994 7924918 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96454   506   III: 7917994-7918499 Caenorhabditis elegans
Exon96458   224   III: 7918546-7918769 Caenorhabditis elegans
Exon96462   65   III: 7919267-7919331 Caenorhabditis elegans
Exon96464   191   III: 7919387-7919577 Caenorhabditis elegans
Exon96467   201   III: 7919626-7919826 Caenorhabditis elegans
Exon96470   128   III: 7919876-7920003 Caenorhabditis elegans
Exon96477   184   III: 7921097-7921280 Caenorhabditis elegans
Exon96480   189   III: 7921590-7921778 Caenorhabditis elegans
Exon96483   89   III: 7921829-7921917 Caenorhabditis elegans
Exon96485   83   III: 7922041-7922123 Caenorhabditis elegans
Exon96491   88   III: 7923202-7923289 Caenorhabditis elegans
Exon96494   82   III: 7923576-7923657 Caenorhabditis elegans
Exon96497   124   III: 7923921-7924044 Caenorhabditis elegans
Exon96498   97   III: 7924822-7924918 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29E4.5b.2 7917994 7924918 -1

1 Sequence

Length
2251

1 Sequence Ontology Term

Identifier Name Description
transcript