WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29E4.5b.1 Sequence Name  C29E4.5b.1
Length (nt)  2242   Chromosome Location  III: 7918054-7924921
Chromosome . Primary Identifier  III Chromosome Location . Start  7918054
Chromosome Location . End  7924921 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29E4.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016203 tag-250 C29E4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29E4.5b C29E4.5b 459   III: 7922053-7922123

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29E4.5b.1 7918054 7924921 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96455   446   III: 7918054-7918499 Caenorhabditis elegans
Exon96457   224   III: 7918546-7918769 Caenorhabditis elegans
Exon96461   65   III: 7919267-7919331 Caenorhabditis elegans
Exon96465   440   III: 7919387-7919826 Caenorhabditis elegans
Exon96469   128   III: 7919876-7920003 Caenorhabditis elegans
Exon96476   184   III: 7921097-7921280 Caenorhabditis elegans
Exon96479   189   III: 7921590-7921778 Caenorhabditis elegans
Exon96482   89   III: 7921829-7921917 Caenorhabditis elegans
Exon96484   83   III: 7922041-7922123 Caenorhabditis elegans
Exon96490   88   III: 7923202-7923289 Caenorhabditis elegans
Exon96493   82   III: 7923576-7923657 Caenorhabditis elegans
Exon96496   124   III: 7923921-7924044 Caenorhabditis elegans
Exon96500   100   III: 7924822-7924921 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29E4.5b.1 7918054 7924921 -1

1 Sequence

Length
2242

1 Sequence Ontology Term

Identifier Name Description
transcript