WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29E4.13c.1 Sequence Name  C29E4.13c.1
Length (nt)  1036   Chromosome Location  III: 7926994-7928717
Chromosome . Primary Identifier  III Chromosome Location . Start  7926994
Chromosome Location . End  7928717 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29E4.13c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00043051 C29E4.13 C29E4.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29E4.13c C29E4.13c 618   III: 7927052-7927168

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29E4.13c.1 7926994 7928717 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96463   175   III: 7926994-7927168 Caenorhabditis elegans
Exon96472   52   III: 7927217-7927268 Caenorhabditis elegans
Exon96479   110   III: 7927390-7927499 Caenorhabditis elegans
Exon96486   81   III: 7927549-7927629 Caenorhabditis elegans
Exon96493   103   III: 7927676-7927778 Caenorhabditis elegans
Exon96500   91   III: 7927857-7927947 Caenorhabditis elegans
Exon96505   90   III: 7927995-7928084 Caenorhabditis elegans
Exon96514   119   III: 7928165-7928283 Caenorhabditis elegans
Exon96521   64   III: 7928398-7928461 Caenorhabditis elegans
Exon96527   151   III: 7928567-7928717 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29E4.13c.1 7926994 7928717 -1

1 Sequence

Length
1036

1 Sequence Ontology Term

Identifier Name Description
transcript