WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29E4.13a.1 Sequence Name  C29E4.13a.1
Length (nt)  988   Chromosome Location  III: 7926999-7928670
Chromosome . Primary Identifier  III Chromosome Location . Start  7926999
Chromosome Location . End  7928670 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29E4.13a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00043051 C29E4.13 C29E4.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29E4.13a C29E4.13a 885   III: 7927052-7927168

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29E4.13a.1 7926999 7928670 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96466   170   III: 7926999-7927168 Caenorhabditis elegans
Exon96470   52   III: 7927217-7927268 Caenorhabditis elegans
Exon96477   110   III: 7927390-7927499 Caenorhabditis elegans
Exon96484   81   III: 7927549-7927629 Caenorhabditis elegans
Exon96491   103   III: 7927676-7927778 Caenorhabditis elegans
Exon96498   91   III: 7927857-7927947 Caenorhabditis elegans
Exon96508   94   III: 7927995-7928088 Caenorhabditis elegans
Exon96513   119   III: 7928165-7928283 Caenorhabditis elegans
Exon96520   64   III: 7928398-7928461 Caenorhabditis elegans
Exon96525   104   III: 7928567-7928670 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29E4.13a.1 7926999 7928670 -1

1 Sequence

Length
988

1 Sequence Ontology Term

Identifier Name Description
transcript