WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29E4.4.1 Sequence Name  C29E4.4.1
Length (nt)  3629   Chromosome Location  III: 7929043-7933055
Chromosome . Primary Identifier  III Chromosome Location . Start  7929043
Chromosome Location . End  7933055 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29E4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003801 npp-15 C29E4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29E4.4 C29E4.4 3390   III: 7929050-7929134

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29E4.4.1 7929043 7933055 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96529   92   III: 7929043-7929134 Caenorhabditis elegans
Exon96530   113   III: 7929179-7929291 Caenorhabditis elegans
Exon96531   612   III: 7929338-7929949 Caenorhabditis elegans
Exon96532   319   III: 7930010-7930328 Caenorhabditis elegans
Exon96533   626   III: 7930374-7930999 Caenorhabditis elegans
Exon96534   305   III: 7931047-7931351 Caenorhabditis elegans
Exon96535   159   III: 7931396-7931554 Caenorhabditis elegans
Exon96536   857   III: 7931606-7932462 Caenorhabditis elegans
Exon96537   546   III: 7932510-7933055 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29E4.4.1 7929043 7933055 1

1 Sequence

Length
3629

1 Sequence Ontology Term

Identifier Name Description
transcript