WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29E4.3a.1 Sequence Name  C29E4.3a.1
Length (nt)  3378   Chromosome Location  III: 7933535-7937708
Chromosome . Primary Identifier  III Chromosome Location . Start  7933535
Chromosome Location . End  7937708 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29E4.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004303 ran-2 C29E4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29E4.3a C29E4.3a 2883   III: 7933684-7933779

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29E4.3a.1 7933535 7937708 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96539   245   III: 7933535-7933779 Caenorhabditis elegans
Exon96541   79   III: 7933825-7933903 Caenorhabditis elegans
Exon96544   279   III: 7933952-7934230 Caenorhabditis elegans
Exon96547   221   III: 7934276-7934496 Caenorhabditis elegans
Exon96550   362   III: 7934544-7934905 Caenorhabditis elegans
Exon96553   161   III: 7934964-7935124 Caenorhabditis elegans
Exon96556   701   III: 7935483-7936183 Caenorhabditis elegans
Exon96559   754   III: 7936227-7936980 Caenorhabditis elegans
Exon96562   104   III: 7937028-7937131 Caenorhabditis elegans
Exon96567   114   III: 7937190-7937303 Caenorhabditis elegans
Exon96570   358   III: 7937351-7937708 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29E4.3a.1 7933535 7937708 1

1 Sequence

Length
3378

1 Sequence Ontology Term

Identifier Name Description
transcript