WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06G4.2d.1 Sequence Name  C06G4.2d.1
Length (nt)  2565   Chromosome Location  III: 7981169-7986317
Chromosome . Primary Identifier  III Chromosome Location . Start  7981169
Chromosome Location . End  7986317 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06G4.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000542 clp-1 C06G4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06G4.2d C06G4.2d 2280   III: 7981169-7981270

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06G4.2d.1 7981169 7986317 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96683   102   III: 7981169-7981270 Caenorhabditis elegans
Exon96688   124   III: 7981365-7981488 Caenorhabditis elegans
Exon96692   75   III: 7982464-7982538 Caenorhabditis elegans
Exon96698   129   III: 7982731-7982859 Caenorhabditis elegans
Exon96704   443   III: 7982907-7983349 Caenorhabditis elegans
Exon96710   159   III: 7983392-7983550 Caenorhabditis elegans
Exon96716   263   III: 7983621-7983883 Caenorhabditis elegans
Exon96722   132   III: 7983944-7984075 Caenorhabditis elegans
Exon96728   470   III: 7984450-7984919 Caenorhabditis elegans
Exon96734   106   III: 7984964-7985069 Caenorhabditis elegans
Exon96740   58   III: 7985118-7985175 Caenorhabditis elegans
Exon96748   90   III: 7985665-7985754 Caenorhabditis elegans
Exon96754   119   III: 7985801-7985919 Caenorhabditis elegans
Exon96757   295   III: 7986023-7986317 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06G4.2d.1 7981169 7986317 1

1 Sequence

Length
2565

1 Sequence Ontology Term

Identifier Name Description
transcript