WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44B9.4a.1 Sequence Name  F44B9.4a.1
Length (nt)  1976   Chromosome Location  III: 8005933-8009821
Chromosome . Primary Identifier  III Chromosome Location . Start  8005933
Chromosome Location . End  8009821 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44B9.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000507 cit-1.1 F44B9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44B9.4a F44B9.4a 1407   III: 8006483-8006588

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44B9.4a.1 8005933 8009821 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96788   656   III: 8005933-8006588 Caenorhabditis elegans
Exon96789   219   III: 8007044-8007262 Caenorhabditis elegans
Exon96790   84   III: 8007633-8007716 Caenorhabditis elegans
Exon96791   113   III: 8007791-8007903 Caenorhabditis elegans
Exon96792   50   III: 8007953-8008002 Caenorhabditis elegans
Exon96793   66   III: 8008062-8008127 Caenorhabditis elegans
Exon96794   88   III: 8008512-8008599 Caenorhabditis elegans
Exon96795   91   III: 8008699-8008789 Caenorhabditis elegans
Exon96796   52   III: 8008839-8008890 Caenorhabditis elegans
Exon96797   66   III: 8008941-8009006 Caenorhabditis elegans
Exon96798   61   III: 8009049-8009109 Caenorhabditis elegans
Exon96799   120   III: 8009238-8009357 Caenorhabditis elegans
Exon96800   82   III: 8009407-8009488 Caenorhabditis elegans
Exon96801   131   III: 8009544-8009674 Caenorhabditis elegans
Exon96802   97   III: 8009725-8009821 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44B9.4a.1 8005933 8009821 -1

1 Sequence

Length
1976

1 Sequence Ontology Term

Identifier Name Description
transcript