WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44B9.2.1 Sequence Name  F44B9.2.1
Length (nt)  1580   Chromosome Location  III: 8022463-8025195
Chromosome . Primary Identifier  III Chromosome Location . Start  8022463
Chromosome Location . End  8025195 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44B9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018407 F44B9.2 F44B9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44B9.2 F44B9.2 1512   III: 8022463-8022943

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44B9.2.1 8022463 8025195 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96840   481   III: 8022463-8022943 Caenorhabditis elegans
Exon96841   112   III: 8023119-8023230 Caenorhabditis elegans
Exon96842   96   III: 8023432-8023527 Caenorhabditis elegans
Exon96843   151   III: 8023571-8023721 Caenorhabditis elegans
Exon96844   60   III: 8023987-8024046 Caenorhabditis elegans
Exon96845   180   III: 8024225-8024404 Caenorhabditis elegans
Exon96846   133   III: 8024457-8024589 Caenorhabditis elegans
Exon96847   108   III: 8024725-8024832 Caenorhabditis elegans
Exon96848   98   III: 8024887-8024984 Caenorhabditis elegans
Exon96849   161   III: 8025035-8025195 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44B9.2.1 8022463 8025195 1

1 Sequence

Length
1580

1 Sequence Ontology Term

Identifier Name Description
transcript