WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44B9.7.1 Sequence Name  F44B9.7.1
Length (nt)  1484   Chromosome Location  III: 8025185-8028042
Chromosome . Primary Identifier  III Chromosome Location . Start  8025185
Chromosome Location . End  8028042 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44B9.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004125 mdt-30 F44B9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44B9.7 F44B9.7 1401   III: 8025263-8025392

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44B9.7.1 8025185 8028042 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96850   208   III: 8025185-8025392 Caenorhabditis elegans
Exon96851   112   III: 8025439-8025550 Caenorhabditis elegans
Exon96852   140   III: 8025603-8025742 Caenorhabditis elegans
Exon96853   123   III: 8025791-8025913 Caenorhabditis elegans
Exon96854   134   III: 8025960-8026093 Caenorhabditis elegans
Exon96855   195   III: 8026383-8026577 Caenorhabditis elegans
Exon96856   226   III: 8026727-8026952 Caenorhabditis elegans
Exon96857   160   III: 8027354-8027513 Caenorhabditis elegans
Exon96858   186   III: 8027857-8028042 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44B9.7.1 8025185 8028042 -1

1 Sequence

Length
1484

1 Sequence Ontology Term

Identifier Name Description
transcript