WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44B9.6.1 Sequence Name  F44B9.6.1
Length (nt)  3366   Chromosome Location  III: 8016648-8020873
Chromosome . Primary Identifier  III Chromosome Location . Start  8016648
Chromosome Location . End  8020873 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44B9.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003021 lin-36 F44B9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44B9.6 F44B9.6 2889   III: 8017122-8017229

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44B9.6.1 8016648 8020873 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96867   582   III: 8016648-8017229 Caenorhabditis elegans
Exon96868   67   III: 8017445-8017511 Caenorhabditis elegans
Exon96869   458   III: 8017560-8018017 Caenorhabditis elegans
Exon96870   405   III: 8018084-8018488 Caenorhabditis elegans
Exon96871   409   III: 8018612-8019020 Caenorhabditis elegans
Exon96872   539   III: 8019122-8019660 Caenorhabditis elegans
Exon96873   121   III: 8019736-8019856 Caenorhabditis elegans
Exon96874   584   III: 8019958-8020541 Caenorhabditis elegans
Exon96875   99   III: 8020617-8020715 Caenorhabditis elegans
Exon96876   102   III: 8020772-8020873 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44B9.6.1 8016648 8020873 -1

1 Sequence

Length
3366

1 Sequence Ontology Term

Identifier Name Description
transcript