WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K06H7.6.1 Sequence Name  K06H7.6.1
Length (nt)  2312   Chromosome Location  III: 8080629-8083701
Chromosome . Primary Identifier  III Chromosome Location . Start  8080629
Chromosome Location . End  8083701 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06H7.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000143 apc-2 K06H7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06H7.6 K06H7.6 2196   III: 8080652-8080704

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K06H7.6.1 8080629 8083701 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon96955   76   III: 8080629-8080704 Caenorhabditis elegans
Exon96956   130   III: 8080748-8080877 Caenorhabditis elegans
Exon96957   133   III: 8081012-8081144 Caenorhabditis elegans
Exon96958   127   III: 8081190-8081316 Caenorhabditis elegans
Exon96959   244   III: 8081360-8081603 Caenorhabditis elegans
Exon96960   148   III: 8081649-8081796 Caenorhabditis elegans
Exon96961   118   III: 8081846-8081963 Caenorhabditis elegans
Exon96962   76   III: 8082010-8082085 Caenorhabditis elegans
Exon96963   139   III: 8082127-8082265 Caenorhabditis elegans
Exon96964   134   III: 8082356-8082489 Caenorhabditis elegans
Exon96965   234   III: 8082534-8082767 Caenorhabditis elegans
Exon96966   98   III: 8082812-8082909 Caenorhabditis elegans
Exon96967   196   III: 8082957-8083152 Caenorhabditis elegans
Exon96968   171   III: 8083197-8083367 Caenorhabditis elegans
Exon96969   288   III: 8083414-8083701 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K06H7.6.1 8080629 8083701 1

1 Sequence

Length
2312

1 Sequence Ontology Term

Identifier Name Description
transcript