WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D2007.2a Sequence Name  D2007.2a
Length (nt)  588   Chromosome Location  III: 8152468-8152582
Chromosome . Primary Identifier  III Chromosome Location . Start  8152468
Chromosome Location . End  8152582
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2007.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE00127 D2007.2, isoform a 21.3 195 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00066098
WBRNAi00043433
WBRNAi00012557
WBRNAi00006763
WBRNAi00030374

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D2007.2a 8152468 8152582 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017042 D2007.2 D2007.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:D2007.2a 8152468 8152582 1
CDS:D2007.2a 8152799 8152862 1
CDS:D2007.2a 8153484 8153611 1
CDS:D2007.2a 8153720 8153817 1
CDS:D2007.2a 8154328 8154510 1

1 Sequence

Length
588

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D2007.2a.1 D2007.2a.1 876   III: 8148963-8154628
Transcript:D2007.2a.2 D2007.2a.2 844   III: 8148967-8154621
Transcript:D2007.2a.3 D2007.2a.3 732   III: 8152435-8154621