WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02F5.6b.1 Sequence Name  C02F5.6b.1
Length (nt)  1476   Chromosome Location  III: 8232651-8234611
Chromosome . Primary Identifier  III Chromosome Location . Start  8232651
Chromosome Location . End  8234611 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02F5.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015349 henn-1 C02F5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02F5.6b C02F5.6b 1329   III: 8232658-8232699

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02F5.6b.1 8232651 8234611 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon97338   49   III: 8232651-8232699 Caenorhabditis elegans
Exon97340   452   III: 8232887-8233338 Caenorhabditis elegans
Exon97342   135   III: 8233417-8233551 Caenorhabditis elegans
Exon97344   355   III: 8233602-8233956 Caenorhabditis elegans
Exon97346   114   III: 8234004-8234117 Caenorhabditis elegans
Exon97348   101   III: 8234191-8234291 Caenorhabditis elegans
Exon97350   270   III: 8234342-8234611 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02F5.6b.1 8232651 8234611 1

1 Sequence

Length
1476

1 Sequence Ontology Term

Identifier Name Description
transcript