WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C02F5.8 Sequence Name  C02F5.8
Length (nt)  735   Chromosome Location  III: 8238139-8238342
Chromosome . Primary Identifier  III Chromosome Location . Start  8238139
Chromosome Location . End  8238342
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02F5.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE00044 TSP-1 27.4 244 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00039446
WBRNAi00039459
WBRNAi00010016
WBRNAi00005420
WBRNAi00028362

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C02F5.8 8238139 8238342 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006627 tsp-1 C02F5.8 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C02F5.8 8238139 8238342 -1
CDS:C02F5.8 8238383 8238448 -1
CDS:C02F5.8 8238496 8238762 -1
CDS:C02F5.8 8238906 8239043 -1
CDS:C02F5.8 8239338 8239397 -1

1 Sequence

Length
735

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C02F5.8.1 C02F5.8.1 899   III: 8238001-8239423