WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02F5.1.1 Sequence Name  C02F5.1.1
Length (nt)  3037   Chromosome Location  III: 8250632-8253943
Chromosome . Primary Identifier  III Chromosome Location . Start  8250632
Chromosome Location . End  8253943 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02F5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002231 knl-1 C02F5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02F5.1 C02F5.1 3033   III: 8250636-8250781

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02F5.1.1 8250632 8253943 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon97393   150   III: 8250632-8250781 Caenorhabditis elegans
Exon97394   90   III: 8250829-8250918 Caenorhabditis elegans
Exon97395   406   III: 8250971-8251376 Caenorhabditis elegans
Exon97396   726   III: 8251422-8252147 Caenorhabditis elegans
Exon97397   544   III: 8252192-8252735 Caenorhabditis elegans
Exon97398   341   III: 8252780-8253120 Caenorhabditis elegans
Exon97399   780   III: 8253164-8253943 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02F5.1.1 8250632 8253943 1

1 Sequence

Length
3037

1 Sequence Ontology Term

Identifier Name Description
transcript