WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09G8.8.1 Sequence Name  F09G8.8.1
Length (nt)  1972   Chromosome Location  III: 8272956-8275971
Chromosome . Primary Identifier  III Chromosome Location . Start  8272956
Chromosome Location . End  8275971 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09G8.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017322 clec-160 F09G8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09G8.8 F09G8.8 1920   III: 8273008-8273068

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09G8.8.1 8272956 8275971 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon97459   113   III: 8272956-8273068 Caenorhabditis elegans
Exon97460   440   III: 8273329-8273768 Caenorhabditis elegans
Exon97461   199   III: 8273941-8274139 Caenorhabditis elegans
Exon97462   197   III: 8274193-8274389 Caenorhabditis elegans
Exon97463   162   III: 8274433-8274594 Caenorhabditis elegans
Exon97464   200   III: 8274640-8274839 Caenorhabditis elegans
Exon97465   88   III: 8274898-8274985 Caenorhabditis elegans
Exon97466   223   III: 8275031-8275253 Caenorhabditis elegans
Exon97467   78   III: 8275309-8275386 Caenorhabditis elegans
Exon97468   122   III: 8275611-8275732 Caenorhabditis elegans
Exon97469   86   III: 8275775-8275860 Caenorhabditis elegans
Exon97470   64   III: 8275908-8275971 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09G8.8.1 8272956 8275971 -1

1 Sequence

Length
1972

1 Sequence Ontology Term

Identifier Name Description
transcript